CDS

Accession Number TCMCG007C25117
gbkey CDS
Protein Id XP_009138676.1
Location complement(join(12736..12765,12849..12960,13051..13293,13391..13492,13561..13678,13788..13926,14105..14289,14365..14475,14670..14732,14818..15029,15149..15163,15259..15329,15408..15611))
Gene LOC103862738
GeneID 103862738
Organism Brassica rapa

Protein

Length 534aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009140428.2
Definition carotenoid 9,10(9,10)-cleavage dioxygenase 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category Q
Description Retinal pigment epithelial membrane protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00465        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008300        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010436        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016110        [VIEW IN EMBL-EBI]
GO:0016115        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016118        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016121        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016124        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016701        [VIEW IN EMBL-EBI]
GO:0016702        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045549        [VIEW IN EMBL-EBI]
GO:0046247        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAGAACTGCATAGTTTCGGTCAACCCTAAACCCTCAAAGGGATTATCCTCTAAGCTTCTCGATCTTGTGGAGAGAGTTGTTGTGAAGCTCATGCACGATGCTTCTCTGCCTCTCCACTACCTCTCCGGCAACTTCGCTCCCGTGCGGGATGAAACTCCTCCGGTGAAGGATCTCCCCGTCGTCCATGGATTTCTTCCAGAGTGCTTGAATGGTGAATTTGTGAGGGTTGGTCCAAATCCCAAGTTTGATCCCGTCGCTGGATATCACTGGTTTGATGGAGATGGGATGATACATGCTGTACGCATCAAAGATGGGAAAGCAACTTATGTTTCTCGTTATGTTAAGACATCACGCCTCAAGCAGGAAGAGTTTTTCGGAGCTCCCAAATTCATGAAGATTGGGGACCTTAAGGGTCTTTTGGGATTGCTTATGGTCTATCTCCAACAGCTCAGAACCAAACTGAAAGTTTTGGACGTCTCTTATGGACATGGAACTGCTAATACAGCCCTCGTCTATCACCATGGAAAACTTCTAGCTCTCTCGGAGGCAGATAAGCCATATGTCGTCAAAGTCTTGGAAGATGGAGACCTTCAAACTCTTGGCATGATGGATTATGACAAGAGATTGACCCACTCCTTCACTGCACACCCTAAAGTTGACCCAACTACCGGTGAAATGTTTACATTTGGCTATTCGCAAACGCCACCTTATCTCACCTACAGAGTGATCTCGGAAGACGGCTTTATGCATGACCCTGTCCCAATTACTATATCTGAGCCAATCATGATGCACGATTTTGCTATTACTGAGACTTACGCAATCTTCATGGATCTTCCTATGCACTTCAGGCCAAAGGAAATGGTGAAAGAGAAGAAAATGGTATACTCATTTGATCCAACAAAAAAGGCTCGTTTTGGTGTTCTTCCACGCTATGCCAAGGATGAACTCATGATTAGATGGTTTGAGCTTCCCAACTGCTTTATATTCCATAACGCCAATGCTTGGGAAGAAGAGGATGAAGTCGTCCTCATCACTTGTCGCCTTGAGAATCCAGATCTTGACATGGTCGGCGGGGATGCGAAAGAAAAACTTGAGAACTTTAGCAACGAACTGTACGAAATGAGATTTAACATGAAAACGGGCTCAGCTTCTCAGAAAAAACTATCGCCATCTGCAGTTGATTTCCCCAGAATCAACGAGTGCTACACTGGAAAGAAACAGCGATATGTATATGGAACAATCCTGGACAGTATCGCCAAGGTTACAGGAATTATCAAGTTTGATCTGCATGCGGAAGCTGAGACAGGGAAAGAAATACTGGAAGTAGGAGGCAATATCAAAGGAATCTATGAGCTGGGTCAAGGCAGATACGGTTCAGAGGCTATATATGTCCCTCGTGAGGCAGGGGAAGAAGATGATGGTTACTTGATATTCTTTGTTCATGATGAAAACACAGGGAAATCATGTGTGAATGTGATTGACGCAAAAACAATGTCTGCTGAGCCAGTGGCAGTGGTGGAGCTGCCGCATAGGGTTCCATATGGCTTCCATGCCTTCTTTGTTACAGAGGAACAACTCCAGGAACAAACTCTTACATAA
Protein:  
MAENCIVSVNPKPSKGLSSKLLDLVERVVVKLMHDASLPLHYLSGNFAPVRDETPPVKDLPVVHGFLPECLNGEFVRVGPNPKFDPVAGYHWFDGDGMIHAVRIKDGKATYVSRYVKTSRLKQEEFFGAPKFMKIGDLKGLLGLLMVYLQQLRTKLKVLDVSYGHGTANTALVYHHGKLLALSEADKPYVVKVLEDGDLQTLGMMDYDKRLTHSFTAHPKVDPTTGEMFTFGYSQTPPYLTYRVISEDGFMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMVYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVGGDAKEKLENFSNELYEMRFNMKTGSASQKKLSPSAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKEILEVGGNIKGIYELGQGRYGSEAIYVPREAGEEDDGYLIFFVHDENTGKSCVNVIDAKTMSAEPVAVVELPHRVPYGFHAFFVTEEQLQEQTLT